{
"name": "TotalSegmentator_v2",
"description": "Tool for segmentation of over 117 classes in CT images. It was trained on a wide range of different CT images (different scanners, institutions, protocols,...) and therefore should work well on most images.",
"input_modalities": {
"0": "CT"
},
"labels": {
"background": 0,
"spleen": 1,
"kidney_right": 2,
"kidney_left": 3,
"gallbladder": 4,
"liver": 5,
"stomach": 6,
"pancreas": 7,
"adrenal_gland_right": 8,
"adrenal_gland_left": 9,
"lung_upper_lobe_left": 10,
"lung_lower_lobe_left": 11,
"lung_upper_lobe_right": 12,
"lung_middle_lobe_right": 13,
"lung_lower_lobe_right": 14,
"esophagus": 15,
"trachea": 16,
"thyroid_gland": 17,
"small_bowel": 18,
"duodenum": 19,
"colon": 20,
"urinary_bladder": 21,
"prostate": 22,
"kidney_cyst_left": 23,
"kidney_cyst_right": 24,
"sacrum": 25,
"vertebrae_S1": 26,
"vertebrae_L5": 27,
"vertebrae_L4": 28,
"vertebrae_L3": 29,
"vertebrae_L2": 30,
"vertebrae_L1": 31,
"vertebrae_T12": 32,
"vertebrae_T11": 33,
"vertebrae_T10": 34,
"vertebrae_T9": 35,
"vertebrae_T8": 36,
"vertebrae_T7": 37,
"vertebrae_T6": 38,
"vertebrae_T5": 39,
"vertebrae_T4": 40,
"vertebrae_T3": 41,
"vertebrae_T2": 42,
"vertebrae_T1": 43,
"vertebrae_C7": 44,
"vertebrae_C6": 45,
"vertebrae_C5": 46,
"vertebrae_C4": 47,
"vertebrae_C3": 48,
"vertebrae_C2": 49,
"vertebrae_C1": 50,
"heart": 51,
"aorta": 52,
"pulmonary_vein": 53,
"brachiocephalic_trunk": 54,
"subclavian_artery_right": 55,
"subclavian_artery_left": 56,
"common_carotid_artery_right": 57,
"common_carotid_artery_left": 58,
"brachiocephalic_vein_left": 59,
"brachiocephalic_vein_right": 60,
"atrial_appendage_left": 61,
"superior_vena_cava": 62,
"inferior_vena_cava": 63,
"portal_vein_and_splenic_vein": 64,
"iliac_artery_left": 65,
"iliac_artery_right": 66,
"iliac_vena_left": 67,
"iliac_vena_right": 68,
"humerus_left": 69,
"humerus_right": 70,
"scapula_left": 71,
"scapula_right": 72,
"clavicula_left": 73,
"clavicula_right": 74,
"femur_left": 75,
"femur_right": 76,
"hip_left": 77,
"hip_right": 78,
"spinal_cord": 79,
"gluteus_maximus_left": 80,
"gluteus_maximus_right": 81,
"gluteus_medius_left": 82,
"gluteus_medius_right": 83,
"gluteus_minimus_left": 84,
"gluteus_minimus_right": 85,
"autochthon_left": 86,
"autochthon_right": 87,
"iliopsoas_left": 88,
"iliopsoas_right": 89,
"brain": 90,
"skull": 91,
"rib_right_4": 92,
"rib_right_3": 93,
"rib_left_1": 94,
"rib_left_2": 95,
"rib_left_3": 96,
"rib_left_4": 97,
"rib_left_5": 98,
"rib_left_6": 99,
"rib_left_7": 100,
"rib_left_8": 101,
"rib_left_9": 102,
"rib_left_10": 103,
"rib_left_11": 104,
"rib_left_12": 105,
"rib_right_1": 106,
"rib_right_2": 107,
"rib_right_5": 108,
"rib_right_6": 109,
"rib_right_7": 110,
"rib_right_8": 111,
"rib_right_9": 112,
"rib_right_10": 113,
"rib_right_11": 114,
"rib_right_12": 115,
"sternum": 116,
"costal_cartilages": 117
},
"numTraining": 1139,
"file_ending": ".nii.gz",
"models": {
"nnV1": [
"nnUNet",
"STU-Net-S",
"STU-Net-B",
"STU-Net-L"
],
"nnV2": [
"nnUNet",
"STU-Net-S",
"STU-Net-B",
"STU-Net-L"
],
"monai": [
"SwinUNETR",
"UNETR"
]
}
}